(Selected)
Bininda-Emonds O, Beck R, MacPhee RDE (2012) Rocking clocks and clocking rocks: a critical look at divergence time estimation in mammals. In Asher R, Mueller J (eds) From clone to bone: the synergy of morphological and molecular tools in palaeobiology: 83-165 (Cambridge University Press)
Enk J, Debruyne R, Devault, A, King CE, Terangen TR, O’Rourke D, Salzburg S, Fisher D, MacPhee RDE, Poinar H (2011) Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths. Genome Biology 12:R51
MacPhee RDE (2011) Basicranial morphology and relationships of Antillean Heptaxodontidae (Rodentia, Ctenohystrica, Caviomorpha).Bulletin of the American Museum of Natural History 363: 1-70
Arnold LJ, Roberts RG, MacPhee RDE, Haile JS, Brock F, Möller P, Froese DG, Tikhonov AN, Chivas AR, Gilbert T, Willerslev E (2010) Paper II—Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially-frozen sediments in Siberia, and their implications for sedimentary ancient DNA studies. Boreas 40: 417-445
Szpak P, Gröcke DR, Debruyne R, MacPhee RDE, Guthrie RD, Froese D, Zazula GD, Patterson WP, Poinar HN (2010) Regional differences in bone collagen ∂13C and ∂15N of Pleistocene mammoths: Implications for paleoecology of the mammoth steppe. Palaeogeography, Palaeoclimatology, Palaeoecology 286: 88-96
MacPhee RDE, Reguero MA (2010) Reinterpretation of a Middle Eocene record of Tardigrada (Pilosa, Xenarthra, Mammalia) from La Meseta Formation, Seymour Island, West Antarctica. American Museum Novitates 3689: 1-21
Haile J, Froese D, MacPhee RDE, Roberts RG, Arnold LJ, Reyes A, Rasmussen M, Nielsen R, Brook BW, Robinson S, Demuro M, Gilbert MTP, Munch K, Austin J, Cooper A, Barnes I, Möller P, Willerslev E (2009) Ancient DNA reveals late survival of mammoth and horse in interior Alaska. Proceedings of the National Academy of Sciences USA106: 22353-22357
MacPhee RDE (2008) Insulae infortunatae: establishing the chronology of Late Quaternary mammal extinctions in the West Indies.InG Haynes (ed) American Megafaunal Extinctions at the End of the Pleistocene: 169-193 (Springer: Dordrecht NL)
Wyatt KB, Campos P, Gilbert MTP, Hynes WH, DeSalle R, Daszak P, Ball S, MacPhee RDE, Greenwood AD (2008) Historical mammal extinction due to introduced infectious disease. PLoS One 3(11): e3602
Debruyne R, Chu G, King C, Bos K, Kuch M, Schwarz C, Szpak P, Gröcke DR, Matheus P, Zazula G, Guthrie D, Froese D, Buigues B, de Marliave C, Flemming C, Poinar D, Fisher D, Southon J, Tikhonov AN, MacPhee RDE,Poinar HN (2008) Out of America:Ancient DNA evidence for a New World origin of Late Quaternary woolly mammoths. Current Biology 18: 1-7